...
Leave approximately 2 µl of the eluate on the beads when removing the eluate for QC and sequencing. i.e., Transfer only 15 – 17 μl of the eluate into a fresh PCR plate or tube . and do not try to transfer the complete sample, as this will lead to bead carryover.
Put your samples once again on the magnet and incubate for 5 minutes.
Transfer 15-17 μl of the supernatant into a fresh PCR plate.Do not try to transfer the complete sample, as this will lead to bead carryover.
Put your samples once again on the magnet when taking an aliquot to run for QC on Tapestation/Bioanalyzer/Fragment Analyzer, or similar.