Common name | Scientific name | Source | Link |
Sponge | Amphimedon queenslandica | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/metazoa/gtf/amphimedon_queenslandica/ |
Arabidopsis | Arabidopsis halleri | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/arabidopsis_halleri/ |
Arabidopsis Thale cress | Arabidopsis thaliana | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/arabidopsis_thaliana/ |
Bartonella | Bartonella henselae | Ensembl release 55 | https://ftp.ensemblgenomes.ebi.ac.uk/pub/bacteria/release-55/gtf/bacteria_0_collection/bartonella_henselae_str_houston_1_gca_000046705/ |
Cow | Bos taurus | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/bos_taurus/ |
Purple False Brome | Brachypodium distachyon | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/brachypodium_distachyon/ |
Nematode Roundworm | Caenorhabditis elegans | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/caenorhabditis_elegans/ |
Yeast | Candida albicans | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/fungi/gtf/candida_albicans/ |
Dog | Canis lupus familiaris | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/canis_lupus_familiaris/ |
Goat | Capra hircus | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/capra_hircus/ |
Painted Turtle | Chrysemys picta bellii | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/chrysemys_picta_bellii/ |
COVID19 | COVID19 (SARS-CoV-2) | Ensembl MN908947.3 | http://ftp.ensemblgenomes.org/pub/viruses/gtf/sars_cov_2/ |
CHO-K1 Cell Line | Cricetulus griseus | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/cricetulus_griseus_chok1gshd/ |
Zebrafish | Danio rerio | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/danio_rerio/ |
Water flea | Daphnia pulex | NCBI refseq GCF_021134715.1_ASM2113471v1 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_021134715.1/ |
Fruit Fly | Drosophila melanogaster | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/drosophila_melanogaster/ |
African Oil Palm | Elaeis guineensis | NCBI refseq GCF_000442705.1 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000442705.1/ |
Cat | Felis catus | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/felis_catus/ |
Fungus | Fusarium oxysporum | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/fungi/gtf/fusarium_oxysporum/ |
Chicken | Gallus gallus | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/gallus_gallus/ |
Human | Homo sapiens | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/homo_sapiens/ |
Barley | Hordeum vulgare | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/hordeum_vulgare/ |
Yeast | Kluyveromyces lactis | NCBI refseq GCF_000002515.2 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000002515.2/ |
Mouse | Mus musculus | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/mus_musculus/ |
Brain-Eating Amoeba | Naegleria fowleri | NCBI refseq GCF_008403515.1_ASM840351v1 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_008403515.1/ |
Starlet Sea Anemone | Nematostella vectensis | NCBI refseq GCF_932526225.1_jaNemVect1.1 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_932526225.1/ |
Rabbit | Oryctolagus cuniculus | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/oryctolagus_cuniculus/ |
Rice | Oryza sativa | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/oryza_sativa/ |
Western Balsam Poplar Tree | Populus trichocarpa | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/populus_trichocarpa/ |
Pseudomonas | Pseudomonas aeruginosa | NCBI refseq GCF_000006765.1_ASM676v1. | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000006765.1/ |
Rat | Rattus norvegicus | Ensembl release 107 | https://ftp.ensembl.org/pub/release-107/gtf/rattus_norvegicus/ |
Baker’s Yeast | Saccharomyces cerevisiae | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/saccharomyces_cerevisiae/ |
Salmon | Salmo salar | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/salmo_salar/ |
Tomato | Solanum lycopersicum | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/solanum_lycopersicum/ |
Potato | Solanum tuberosum | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/solanum_tuberosum/ |
Sorghum | Sorghum bicolor | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/sorghum_bicolor/ |
Pig | Sus scrofa | Ensembl release 108 | https://ftp.ensembl.org/pub/release-108/gtf/sus_scrofa/ |
Cacao Tree | Theobroma cacao criollo | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/theobroma_cacao_criollo/ |
Fungus | Yarrowia lipolytica | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/fungi/gtf/yarrowia_lipolytica/ |
Maize/Corn | Zea mays | Ensembl release 55 | http://ftp.ensemblgenomes.org/pub/release-55/plants/gtf/zea_mays/ |